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PUBLICATIONS

Hughes, A. H., Magot, F., Tawfike, A. F., Rad-Menéndez, C., Thomas, N., Young, L. C., Stucchi, L., Carettoni, D., Stanley, M. S., Edrada-Ebel, R., Duncan, K. R.* (2021) Exploring the Chemical Space of Macro- and Micro-Algae Using Comparative Metabolomics. Microorganisms, 9(2), 311; [*corresponding author]. https://doi.org/10.3390/microorganisms9020311

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Soldatou, S., Eldjarn, G. H., Ramsey, A., van der Hooft, J. J. J., Hughes, A. H., Rogers, S. & Duncan, K. R, Comparative metabologenomics analysis of polar actinomycetes (2021) Marine Drugs. Accepted / in press

van der Hooft, J. J., Mohimani, H., Bauermeister, A., Dorrestein, P. C., Duncan, K. R.*, Medema, M. H.* (2020) Linking Genomics and Metabolomics to Chart Specialized Metabolite Discovery. Chem. Soc. Rev., 2020,49, 3297-3314 [*co-corresponding author] https://doi.org/10.1039/D0CS00162G

Prudence, S. M. M., Addington, E. , Castaño-Espriu, L.,  Mark, D. R., Pintor-Escobar, L., Russell, A. H., McLean T. C. Advances in Actinomycete Research: an Actinobase Review of 2019. Microbiology. https://doi.org/10.1099/mic.0.000944

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Eldjarn, G. Ramsay, A. van der Hooft, JJJ. Duncan, K. R. Soldatou, S. Rousu, J. Rogers, S*. (2020). Ranking Microbial Metabolomic and Genomic Links Using Correlation-Based and Feature-Based Scoring Functions. [* Corresponding author]. [bioRxiv preprint]. https://doi.org/10.1101/2020.06.12.148205

Millán-Aguiñaga, N. Soldatou, S., Brozio, S., Munnoch, J. T., Howe, J., Hoskisson, P. A., Duncan, K. R*. (2019) Awakening Ancient Polar Actinobacteria: Diversity, Evolution and Specialized Metabolite Potential. [* Corresponding author]. Microbiology. 165(1), 1169-1180, https://doi.org/10.1099/mic.0.000845

Soltatou, S.+, Eldjarn, G. H.+, Huerta-Uribe, A.+, Rogers, S., Duncan, K. R.* (2019) Linking Biosynthetic and Chemical Space to Accelerate Microbial Secondary Metabolite Discovery. [+ Co-first author and * corresponding author]. FEMS Microbiology Letters. 366(13), fnz142. doi.org/10.1093/femsle/fnz142 

​Hicks, N. R.*+, Liu, X., Gregory, R., Kenny, J. Lucaci, A., Lenzi, L., Paterson, D. M., Duncan, K. R.*+ (2018) Temperature Driven Changes in Benthic Bacterial Diversity Influences Biogeochemical Cycling in Costal Sediments. [+ Co-first author and * Co-corresponding author].  Frontiers in Microbiology. ​doi: 
https://doi.org/10.3389/fmicb.2018.01730

Vallet, M., Vanbellingen, Q. P. Fu, T., Le Caer, J-P, Della-Negra, S., Touboul, D., Duncan, K. R., Nay, B., Brunelle, A. and Prado, S. (2017) An integrative approach to decipher the chemical antagonism between the competing endophytes Paraconiothyrium variabile and Bacillus subtilis. Journal of Natural Products doi:10.1021/acs.jnatprod.6b01185

Wang, M., Carver, J. J., Phelan, V. V., Sanchez, L. M., Garg, N., Peng, Y., Nguyen, D. D., Watrous, J., Kapono, C. A., Luzzatto-Knaan, T., Porto, C., Bouslimani, A., Melnik, A. V., Meehan, M. J., Liu, W-T., Crüseman, M., Boudreau, P. D., Esquenazi, E., Sandoval-Calderón, M., Kersten, R. D., Pace, L. A., Quinn, R. A., Duncan, K. R., Hsu, C-C., Floros, D. J., Gavilan, R. G., Kleigrewe, K., Northen, T., Dutton, R. J., Parrot, D., Carlson, E. E., Aigle, B., Michelsen, C. F., Jelsbak, L., Sohlenkamp, C., Pevzner, P., Edlund, A., McLean, J., Piel, J., Murphy, B. T., Gerwick, L., Liaw, C-C., Yang, Y-L., Humpf, H-U., Maansson, M., Keyzers, R. A., Sims, A. C., Johnson, A. R., Sidebottom, A. M., Sedio, B. E., Klitgaard, A., Larson, C. B., Boya P, C. A., Torres-Mendoza, D., Gonzalez, D. J., Silva, D. B., Marques, L. M., Demarque, D. P., Pociute, E., O'Neill, E. C., Briand, E., Helfrich, E. J. N., Granatosky, E. A., Glukhov, E., Ryffel, F., Houson, H., Mohimani, H., Kharbush, J. J., Zeng, Y., Vorholt, J. A., Kurita, K. L., Charusanti, P., McPhail, K. L., Nielsen, K. F., Vuong, L., Elfeki, M., Traxler, M. F., Engene, N., Koyama, N., Vining, O. B., Baric, R., Silva, R. S., Mascuch, S. J., Tomasi, S., Jenkins, S., Macherla, V., Hoffman, T., Agarwal, V., Williams, P. G., Dai, J., Neupane, R., Gurr, J., Rodríguez, A. M. C., Lamsa, A., Zhang, C., Dorrestein, K., Duggan, B. M., Almaliti, J., Allard, P, M., Phapale, P., Nothias, L. F., Alexandrov, T., Litaudon, M., Wolfender, J. L., Kyle, J. E., Metz, T. O., Peryea, T., Nguyen, D-T., VanLeer, D., Shinn, P., Jadhav, A., Müller, R., Waters, K. M., Shi, W., Liu, X., Zhang, L., Knight, R., Jensen, P. R., Palsson, B. O., Pogliano, K., Linington, R. G.,  Gutiérrez, M., Lopes, N. P., Gerwick, W. H., Moore, B. S., Dorrestein, P. C. Bandeira, N. (2016) Sharing and community curation of  mass spectra by GNPS. Nature Biotechnology 34, 828–837. doi:10.1038/nbt.3597
 
Buchholtz, H. and Duncan, K. R.* (2016) Antarctic Sponge Associated Microbial Chemistry with Biomedical Relevance – the Need for Ecologically Driven Studies. [*Corresponding author] August 2016. Curr. Org. Chem. 21(5): 395-401 doi:
10.2174/1385272820666161020122153
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Purves, K., MacIntyre, L., Brennan, D., Hreggviosson, G. O., Kuttner, E., Asgeirsdottir, M. E., Young, L. C., Green, D.H. Edrada-Ebel, R, Duncan, K.R.* (2016) Using Molecular Networking for Microbial Secondary Metabolite Bioprospecting. Metabolites 6(1): 2. [*Corresponding author] doi:10.3390/metabo6010002
 
Duncan, K.R., Crüsemann, M., Lechner, A., Sarkar, A., Li, J., Ziemert, N., Wang, M., Moore, B.S., Dorrestein, P.C. and Jensen, P.R. (2015) Molecular Network and Pattern-Based Genome Mining Improves Discovery of Biosynthetic Gene Clusters and their Products from Salinispora Species. Chem. & Biol. 22: 1-12. http://dx.doi.org/10.1016/j.chembiol.2015.03.010 
 
Patin, N.V., Duncan, K.R., Jensen, P. R. (2015) Competitive Strategies Differentiate Closely-Related Species of Marine Bacteria. ISME J. 10(2): 478-490 doi.org/10.1038/ismej.2015.128
 
Duncan, K., Haltli, B., Gill, K.A. and Kerr R.G. (2014) Bioprospecing from Marine Sediments of New Brunswick, Canada: Exploring the Relationship Between Total Bacterial Diversity and Actinobacteria Diversity. Mar. Drugs, 12, 899-925; doi:10.3390/md12020899
 
Duncan, K.R., Haltli, B., Gill, K.A., Correa, H., Berrué, F. and Kerr, R.G. (2014) Exploring the Diversity and Metabolic Potential of Actinomycetes from Temperate Marine Sediments from Newfoundland, Canada. J. Ind. Microbiol. Biotech 42(1): 57-72 doi:10.1007/s10295-014-1529x  
 
Weitz, M., Duncan, K., Pattin, N.V., and Jensen, P.R. (2013) Antagonistic Interactions Mediated by Marine Bacteria, the Role of Small Molecules. J. Chem. Ecol. 39(7): 879-891 doi:10.1007/s10886-013-0316-x
 
Forner, D., Berrue, F., Correa, H., Duncan, K., Kerr, R.G. (2013) Chemical Dereplication of Marine Actinomycetes by Liquid Chromatography - High Resolution Mass Spectrometry Profiling and Statistical Analysis Anal. Chim. Acta. 12(805): 70-79 doi:10.1016/j.aca.2013.10.029
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  • Home
  • About
  • News
  • Lab members
    • Opportunities
  • KATHERINE DUNCAN
  • LAB
    • Social
  • PUBLICATIONS
  • COLLABORATORS & RESOURCES